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Publications
For more detailed information, please refer to the following scientific literature.
- Fish DJ, Horne MT, Brewood GP, Goodarzi JP, Alemayehu S, Bhandiwad A, Searles BP, Benight AS. DNA multiplex hybridization on microarrays and thermodynamic stability in solution: a direct comparison. Nucleic Acids Res. 2007 December; 35(21): 7197–7208.
- Fish DJ, Horne MT, Searles BP, Brewood GP, Benight AS. Multiplex SNP Discrimination. Biophys J. 2007 May 15;92(10):L89-91.
- Horne MT, Fish DJ, Benight AS. Statistical thermodynamics and kinetics of DNA multiplex hybridization reactions. Biophys J. 2006 Dec 1;91(11):4133-53.
- Benight AS. The four-state model of a linear lattice: application to ligand-controlled hybridization of short duplex DNAs. Biopolymers. 2003 Jul;69(3):406-20.
- Riccelli PV, Hall TS, Pancoska P, Mandell KE, Benight AS. DNA sequence context and multiplex hybridization reactions: melting studies of heteromorphic duplex DNA complexes. J Am Chem Soc. 2003 Jan 8;125(1):141-50.
- Benight AS, Pancoska P, Owczarzy R, Vallone PM, Nesetril J, Riccelli PV. Calculating sequence-dependent melting stability of duplex DNA oligomers and multiplex sequence analysis by graphs. Methods Enzymol. 2001;340:165-92.
- Riccelli PV, Merante F, Leung KT, Bortolin S, Zastawny RL, Janeczko R, Benight AS. Hybridization of single-stranded DNA targets to immobilized complementary DNA probes: comparison of hairpin versus linear capture probes. Nucleic Acids Res. 2001 Feb 15;29(4):996-1004.
- Hall TS, Pancoska P, Riccelli PV, Mandell K, Benight AS. Sequence context and thermodynamic stability of a single base pair mismatch in short deoxyoligonucleotide duplexes. J Am Chem Soc. 2001 Nov 28;123(47):11811-2.
- Vallone PM, Benight AS. Thermodynamic, spectroscopic, and equilibrium binding studies of DNA sequence context effects in four 40 base pair deoxyoligonucleotides. Biochemistry. 2000 Jul 4;39(26):7835-46.
- Riccelli PV, Vallone PM, Kashin I, Faldasz BD, Lane MJ, Benight AS. Thermodynamic, spectroscopic, and equilibrium binding studies of DNA sequence context effects in six 22-base pair deoxyoligonucleotides. Biochemistry. 1999 Aug 24;38(34):11197-208.
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